Victor
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Calculate structural scores with info derived from PSI-PRED. More...
Public Member Functions | |
Ss2 (SubMatrix *subStr, AlignmentData *ad, Ss2Input *psipred1, Ss2Input *psipred2, double cSs2) | |
Default constructor. | |
Ss2 (const Ss2 &orig) | |
Copy constructor. | |
virtual | ~Ss2 () |
Destructor. | |
virtual void | copy (const Ss2 &orig) |
Copy orig object to this object ("deep copy"). More... | |
virtual void | copy (const Structure &orig) |
Copy orig object to this object ("deep copy"). | |
virtual Ss2 * | newCopy () |
Construct a new "deep copy" of this object. More... | |
Ss2 & | operator= (const Ss2 &orig) |
Assignment operator. | |
virtual void | reverse () |
Reverse template secondary structure. | |
virtual double | scoringStr (int i, int j) |
Calculate structural scores to create matrix values. More... | |
Data Fields | |
SubMatrix * | subStr |
Structural substitution matrix. | |
Calculate structural scores with info derived from PSI-PRED.
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Copy orig object to this object ("deep copy").
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