Victor
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Implement I/O objects for handling PHD files. More...
Public Member Functions | |
ProfInput () | |
Default constructor. | |
ProfInput (istream &is) | |
istream constructor. | |
ProfInput (const ProfInput &orig) | |
Copy constructor. | |
virtual | ~ProfInput () |
Destructor. | |
virtual void | copy (const ProfInput &orig) |
Copy orig object to this object ("deep copy"). More... | |
char | getProfBE (int i) |
Return the ASA prediction of Prof. | |
char | getProfMixSSBE (char ssChar, char beChar) |
Return the charachter for SSE/ASA combination. More... | |
char | getProfSS (int i) |
Return the SSE prediction of Prof. | |
virtual ProfInput * | newCopy () |
Construct a new "deep copy" of this object. More... | |
ProfInput & | operator= (const ProfInput &orig) |
Assignment operator. More... | |
virtual unsigned int | size () const |
Return the size of the object referred as the number of aminoacids. | |
Static Public Member Functions | |
static void | pReadString (istream &is, string &data1, string &data2, string &data3) |
Helper function used to read a string construct. More... | |
static void | pWriteString (ostream &os, string data1, string data2, string data3) |
Helper function used to write a string construct. More... | |
Friends | |
ostream & | operator<< (ostream &os, const ProfInput &object) |
Output operator. More... | |
istream & | operator>> (istream &is, ProfInput &object) |
Input operator. More... | |
Implement I/O objects for handling PHD files.
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virtual |
Copy orig object to this object ("deep copy").
orig |
char getProfMixSSBE | ( | char | ssChar, |
char | beChar | ||
) |
Return the charachter for SSE/ASA combination.
ssChar | |
beChar |
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virtual |
Construct a new "deep copy" of this object.
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static |
Helper function used to read a string construct.
is | |
data1 | |
data2 | |
data3 |
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static |
Helper function used to write a string construct.
os | |
data1 | |
data2 | |
data3 |
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friend |
Output operator.
os | |
object |
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friend |
Input operator.
is | |
object |