Difference between revisions of "Victor"

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The Victor library ('''Vi'''rtual '''C'''onstruction '''To'''olkit for P'''r'''oteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods that can be grouped in the following main modules:
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The Victor library ('''Vi'''rtual '''C'''onstruction '''To'''olkit for P'''r'''oteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. This Wiki will help you to discover how to use the Victor package through an example driven approach. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods. We suggest to read the [[Introduction]] before the [[Tutorial]] to have an overview of the main concepts.
 
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<br><br>The project is maintained by the '''[http://protein.bio.unipd.it BioComputingUP]''' group.
* [[Biopool]] - '''BIOP'''olymer '''O'''bject '''O'''riented '''L'''ibrary. The core library that generates the protein object and provides useful methods to manipulate the structure.
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<br>The library is distributed under the '''[http://www.gnu.org/licenses/gpl.html GPL license]'''.
 
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* [[Energy]] - A library to calculate statistical potentials from protein structures.
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* [[Lobo]] - '''LO'''op '''B'''uild-up and '''O'''ptimization. Ab-intio prediction of missing loop conformation in protein models.
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    [[Getting started]] <hr>Here you will find a resume guide on how to download and install Victor2.0.
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  [[Detailed Installation]]  <hr>Here you will find a complete guide on how to download and install Victor2.0.
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[[Introduction to Victor package]]  <hr>Here you will find an explanation for some of the concepts used for victor2.0 package.
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[[Features]] <hr> Here you will find a detailed explanation of the package.
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[[Tutorial]]  <hr>how to use the Victor package through an example driven approach.
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{{Developers}} <hr> Here you will find the detailed documentation for all classes and methods.
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[[Community]] <hr> Here you will find information about the research lab Biocomputing Up.
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{{References}}  <hr>Here you will find references for some parts of the package.
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{{Applications}}  Here you will find a list of the applications that use the package.
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This Wiki will help you to discover how to use the Victor package through an example driven approach. We believe this is the easiest way to get confident with the Victor library.
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For a detailed description of all classes and methods please visit the '''Doxygen''' documentation [http://kim.bio.unipd.it/local/DoxyBiopool2014/index.html Victor2.0 complete guide].
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<td class="mainpage_hubbox" valign="top">
 
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<div class="mainpage_hubtitle"><b>Using MediaWiki</b></div>
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<div class="mainpage_hubtitle"><b>[[Installation]]</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="mainpage_boxcontents">
<div class="center">
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Getting started. How to '''download''' and '''install''' Victor.
<div class="floatnone"></div>
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What is a wiki?
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</div>
 
</div>
 
</td>
 
</td>
  
 
<td class="mainpage_hubbox" valign="top">
 
<td class="mainpage_hubbox" valign="top">
<div class="mainpage_hubtitle"><b>System Administration</b></div>
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<div class="mainpage_hubtitle"><b>[[Introduction]]</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="mainpage_boxcontents">
Text
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Main concepts and '''theory''' to understand Victor.
 
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</div>
 
</td>
 
</td>
  
 
<td class="mainpage_hubbox" valign="top">
 
<td class="mainpage_hubbox" valign="top">
<div class="mainpage_hubtitle"><b>Developing &amp; Extending</b></div>
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<div class="mainpage_hubtitle"><b>[[Tutorial]]</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="mainpage_boxcontents">
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How to use Victor through a test case '''example'''.
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<td class="mainpage_hubbox" valign="top">
 
<td class="mainpage_hubbox" valign="top">
<div class="mainpage_hubtitle"><b>Using MediaWiki</b></div>
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<div class="mainpage_hubtitle"><b>[[Features]]</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="mainpage_boxcontents">
<div class="center">
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'''Cookbook'''. How to use all Victor applications, step-by-step.
<div class="floatnone"></div>
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</div>
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What is a wiki?
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</div>
 
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</td>
 
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<td class="mainpage_hubbox" valign="top">
 
<td class="mainpage_hubbox" valign="top">
<div class="mainpage_hubtitle"><b>System Administration</b></div>
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<div class="mainpage_hubtitle"><b><span class="plainlinks">[[Documentation]]</span></b></div>
 
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'''Doxygen''' documentation. Detailed description of all classes, methods and '''Unit Test'''.
 
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</td>
 
</td>
  
 
<td class="mainpage_hubbox" valign="top">
 
<td class="mainpage_hubbox" valign="top">
<div class="mainpage_hubtitle"><b>Developing &amp; Extending</b></div>
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<div class="mainpage_hubtitle"><b>[[Community]]</b></div>
 
<div class="mainpage_boxcontents">
 
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<div class="center">
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The '''community''' involved in the Victor project.
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<td class="mainpage_hubbox" valign="top">
 
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<div class="mainpage_hubtitle"><b>Using MediaWiki</b></div>
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<div class="mainpage_hubtitle"><b>[[References]]</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="mainpage_boxcontents">
<div class="center">
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Here you will find '''references''' for some parts of the package.
<div class="floatnone"></div>
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</div>
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What is a wiki?
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</div>
 
</div>
 
</td>
 
</td>
  
 
<td class="mainpage_hubbox" valign="top">
 
<td class="mainpage_hubbox" valign="top">
<div class="mainpage_hubtitle"><b>System Administration</b></div>
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<div class="mainpage_hubtitle"><b>[[Applications]]</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="mainpage_boxcontents">
Text
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Here you will find a list of the '''applications''' that use the package.
 
</div>
 
</div>
 
</td>
 
</td>
  
<td class="mainpage_hubbox" valign="top">
 
<div class="mainpage_hubtitle"><b>Developing &amp; Extending</b></div>
 
<div class="mainpage_boxcontents">
 
<div class="center">
 
Center
 
</div>
 
Text
 
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</tr>
 
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Latest revision as of 17:14, 10 October 2014

The Victor library (Virtual Construction Toolkit for Proteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. This Wiki will help you to discover how to use the Victor package through an example driven approach. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods. We suggest to read the Introduction before the Tutorial to have an overview of the main concepts.

The project is maintained by the BioComputingUP group.
The library is distributed under the GPL license.

Getting started. How to download and install Victor.

Main concepts and theory to understand Victor.

How to use Victor through a test case example.

Cookbook. How to use all Victor applications, step-by-step.

Doxygen documentation. Detailed description of all classes, methods and Unit Test.

The community involved in the Victor project.

Here you will find references for some parts of the package.

Here you will find a list of the applications that use the package.