Difference between revisions of "Victor"

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The Victor library ('''Vi'''rtual '''C'''onstruction '''To'''olkit for P'''r'''oteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. This Wiki will help you to discover how to use the Victor package through an example driven approach. We suggest to read the [[Introduction]] before the [[Tutorial]]. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods that can be grouped in the following main modules:
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The Victor library ('''Vi'''rtual '''C'''onstruction '''To'''olkit for P'''r'''oteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. This Wiki will help you to discover how to use the Victor package through an example driven approach. We suggest to read the [[Introduction]] before the [[Tutorial]] to have an overview of the main concepts. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods that can be grouped in the following main modules:
  
 
* [[Biopool]] - '''BIOP'''olymer '''O'''bject '''O'''riented '''L'''ibrary. The core library that generates the protein object and provides useful methods to manipulate the structure.
 
* [[Biopool]] - '''BIOP'''olymer '''O'''bject '''O'''riented '''L'''ibrary. The core library that generates the protein object and provides useful methods to manipulate the structure.
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* [[Lobo]] - '''LO'''op '''B'''uild-up and '''O'''ptimization. Ab-intio prediction of missing loop conformation in protein models.  
 
* [[Lobo]] - '''LO'''op '''B'''uild-up and '''O'''ptimization. Ab-intio prediction of missing loop conformation in protein models.  
 
 
 
 
 
 
 
 
  
 
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Revision as of 14:47, 24 July 2014

The Victor library (Virtual Construction Toolkit for Proteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. This Wiki will help you to discover how to use the Victor package through an example driven approach. We suggest to read the Introduction before the Tutorial to have an overview of the main concepts. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods that can be grouped in the following main modules:

  • Biopool - BIOPolymer Object Oriented Library. The core library that generates the protein object and provides useful methods to manipulate the structure.
  • Energy - A library to calculate statistical potentials from protein structures.
  • Lobo - LOop Build-up and Optimization. Ab-intio prediction of missing loop conformation in protein models.

Here you will find a resume guide on how to download and install Victor.

Here you will find an explanation for some of the concepts used for Victor package.

How to use the Victor package through an example driven approach.

Here you will find a detailed explanation of the package.

Doxygen documentation [1]. Detailed description of all classes and methods.

Here you will find information about the research lab Biocomputing Up. Text

Here you will find references for some parts of the package.

Here you will find a list of the applications that use the package.