Difference between revisions of "Victor"

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Revision as of 16:12, 23 July 2014

The Victor library (Virtual Construction Toolkit for Proteins) is an open-source project dedicated to providing tools for analyzing and manipulating protein structures. Victor strength is its computational efficiency thanks to a C++ implementation and a vast repertoire of classes and methods that can be grouped in the following main modules:

  • Biopool - BIOPolymer Object Oriented Library. The core library that generates the protein object and provides useful methods to manipulate the structure.
  • Energy - A library to calculate statistical potentials from protein structures.
  • Lobo - LOop Build-up and Optimization. Ab-intio prediction of missing loop conformation in protein models.
Getting started
Here you will find a resume guide on how to download and install Victor2.0.

Detailed Installation
Here you will find a complete guide on how to download and install Victor2.0.
Introduction to Victor package
Here you will find an explanation for some of the concepts used for victor2.0 package.
Here you will find a detailed explanation of the package.

how to use the Victor package through an example driven approach.
Here you will find the detailed documentation for all classes and methods.
Here you will find information about the research lab Biocomputing Up.
Here you will find references for some parts of the package.

Template:Applications Here you will find a list of the applications that use the package.

This Wiki will help you to discover how to use the Victor package through an example driven approach. We believe this is the easiest way to get confident with the Victor library. For a detailed description of all classes and methods please visit the Doxygen documentation Victor2.0 complete guide.

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Using MediaWiki
<a href="/wiki/User_hub" title="User hub"><img alt="Crystal Clear app display.png" src="//upload.wikimedia.org/wikipedia/commons/thumb/9/9b/Crystal_Clear_app_display.png/80px-Crystal_Clear_app_display.png" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/9/9b/Crystal_Clear_app_display.png/120px-Crystal_Clear_app_display.png 1.5x, //upload.wikimedia.org/wikipedia/commons/9/9b/Crystal_Clear_app_display.png 2x" data-file-width="128" data-file-height="128" height="80" width="80"></a>

<a href="//en.wikipedia.org/wiki/Wiki" class="extiw" title="w:Wiki">What is a wiki?</a>

  • Learn <a href="/wiki/Help:Navigation" title="Help:Navigation">how to navigate</a>
  • Learn <a href="/wiki/Help:Editing_pages" title="Help:Editing pages">how to edit a page</a>
  • Get <a href="/wiki/User_hub" title="User hub">more help</a>
System Administration
<a href="/wiki/Sysadmin_hub" title="Sysadmin hub"><img alt="Nuvola-inspired-terminal.svg" src="//upload.wikimedia.org/wikipedia/commons/thumb/7/72/Nuvola-inspired-terminal.svg/94px-Nuvola-inspired-terminal.svg.png" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/7/72/Nuvola-inspired-terminal.svg/141px-Nuvola-inspired-terminal.svg.png 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/7/72/Nuvola-inspired-terminal.svg/188px-Nuvola-inspired-terminal.svg.png 2x" data-file-width="40" data-file-height="34" height="80" width="94"></a>

<a href="/wiki/Installation" title="Installation" class="mw-redirect">Install</a> & <a href="/wiki/Manual:Configuration" title="Manual:Configuration">configure</a> MediaWiki

  • <a href="/wiki/Manual:Upgrading" title="Manual:Upgrading">Upgrade</a> an existing MediaWiki installation
  • Add features with <a href="/wiki/Manual:Extensions" title="Manual:Extensions">third-party extensions</a>
  • Get <a href="/wiki/Sysadmin_hub" title="Sysadmin hub">more sysadmin help</a>
Developing & Extending
<a href="/wiki/Developer_hub" title="Developer hub"><img alt="Crystal Clear app tutorials.png" src="//upload.wikimedia.org/wikipedia/commons/thumb/0/0b/Crystal_Clear_app_tutorials.png/80px-Crystal_Clear_app_tutorials.png" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/0/0b/Crystal_Clear_app_tutorials.png/120px-Crystal_Clear_app_tutorials.png 1.5x, //upload.wikimedia.org/wikipedia/commons/0/0b/Crystal_Clear_app_tutorials.png 2x" data-file-width="128" data-file-height="128" height="80" width="80"></a>

<a href="/wiki/How_to_become_a_MediaWiki_hacker" title="How to become a MediaWiki hacker">Become a MediaWiki hacker</a>

  • Learn to use the <a href="/wiki/API" title="API" class="mw-redirect">API</a> and <a href="/wiki/Manual:Developing_extensions" title="Manual:Developing extensions">write extensions</a>
  • Browse the <a href="/wiki/Manual:Contents" title="Manual:Contents">developer docs</a> and <a class="external text" href="https://doc.wikimedia.org/mediawiki-core/master/php/html/">class reference</a>
  • Already a hacker? Visit the <a href="/wiki/Developer_hub" title="Developer hub">developer hub</a>