Difference between revisions of "Applications"

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|[http://protein.bio.unipd.it/align/ Align]
 
|[http://protein.bio.unipd.it/align/ Align]
 
|Pairwise protein sequence alignment and analysis server
 
|Pairwise protein sequence alignment and analysis server
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|[http://www.eurekaselect.com/89865/article 2006, Curr Drug Discov Technol.]
 
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|RING
 
|Residue interaction network generation method for Cytoscape
 
|Residue interaction network generation method for Cytoscape
 
|[http://bioinformatics.oxfordjournals.org/content/27/14/2003.long 2011, Bioinformatics]
 
|[http://bioinformatics.oxfordjournals.org/content/27/14/2003.long 2011, Bioinformatics]
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|[http://swissmodel.expasy.org/qmean/ QMEAN]
 
|[http://swissmodel.expasy.org/qmean/ QMEAN]
 
|Protein model quality estimation based on a comprehensive evaluation
 
|Protein model quality estimation based on a comprehensive evaluation
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|[http://onlinelibrary.wiley.com/doi/10.1002/prot.21715/abstract;jsessionid=E2B6D483CF516BA998478958E8E39E53.f01t01?systemMessage=Wiley+Online+Library+will+be+disrupted+on+the+18th+October+from+10%3A00+BST+%2805%3A00+EDT%29+for+essential+maintenance+for+approximately+two+hours+as+we+make+upgrades+to+improve+our+services+to+you 2008, Proteins]
 
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|[http://protein.bio.unipd.it/homer/auto.html Homer]
 
|[http://protein.bio.unipd.it/homer/auto.html Homer]

Revision as of 09:39, 15 October 2014

List of some of the Applications using the package

Online Service Description Reference
Align Pairwise protein sequence alignment and analysis server 2006, Curr Drug Discov Technol.
RING Residue interaction network generation method for Cytoscape 2011, Bioinformatics
TAP Validate the local torsion angles for protein structures 2007, BMC Bioinformatics
QMEAN Protein model quality estimation based on a comprehensive evaluation 2008, Proteins
Homer Homology Modeling server, automatic template selection
LOBO Loop modelling server for protein structures
FRST Protein model quality estimation method based on energy evaluation