ALIGN: Pairwise Alignment

Version 1.0

7/07/2014 Update: Computations are now carried out on a large state-of-the-art cluster. In addition, large jobs are split into 8 parallel batches. .
General Informations
E-Mail address Name of alignment (optional)
E-mail notification of results
First sequence (FASTA format)

- OR - Upload a FASTA file:

Second Sequence (FASTA format)

- OR -   Upload a FASTA file:
Alignment options
Alignment type
Alignment algorithm
Sub-optimal alignments
Gap open
Gap extension
Use secondary structure